Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hoxc9P09633 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc9P09633 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hoxc9P09633 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc9P09633 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Hoxc9P09633 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc9P09633 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.67■□□□□ 0.9
Hoxc9P09633 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Grk6-207ENSMUST00000225925 2769 ntBASIC20.67■□□□□ 0.9
Hoxc9P09633 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.67■□□□□ 0.9
Hoxc9P09633 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc9P09633 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.66■□□□□ 0.9
Hoxc9P09633 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Hoxc9P09633 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.66■□□□□ 0.9
Hoxc9P09633 Gm17271-201ENSMUST00000165535 355 ntBASIC20.66■□□□□ 0.9
Hoxc9P09633 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.66■□□□□ 0.9
Hoxc9P09633 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.66■□□□□ 0.9
Hoxc9P09633 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.66■□□□□ 0.9
Hoxc9P09633 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.66■□□□□ 0.9
Hoxc9P09633 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.66■□□□□ 0.9
Hoxc9P09633 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.66■□□□□ 0.9
Hoxc9P09633 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hoxc9P09633 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc9P09633 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc9P09633 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Hoxc9P09633 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxc9P09633 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxc9P09633 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxc9P09633 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.64■□□□□ 0.9
Hoxc9P09633 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Hoxc9P09633 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Auts2-212ENSMUST00000178555 309 ntBASIC20.64■□□□□ 0.89
Hoxc9P09633 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Hoxc9P09633 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.64■□□□□ 0.89
Hoxc9P09633 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms