Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
P06344 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.25□□□□□ -0.13
P06344 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.25□□□□□ -0.13
P06344 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.25□□□□□ -0.13
P06344 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
P06344 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.25□□□□□ -0.13
P06344 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.25□□□□□ -0.13
P06344 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
P06344 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.25□□□□□ -0.13
P06344 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06344 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.25□□□□□ -0.13
P06344 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
P06344 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P06344 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
P06344 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
P06344 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.24□□□□□ -0.13
P06344 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.24□□□□□ -0.13
P06344 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.24□□□□□ -0.13
P06344 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.24□□□□□ -0.13
P06344 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.24□□□□□ -0.13
P06344 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
P06344 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.24□□□□□ -0.13
P06344 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06344 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P06344 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P06344 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
P06344 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.23□□□□□ -0.13
P06344 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.23□□□□□ -0.13
P06344 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06344 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.22□□□□□ -0.13
P06344 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P06344 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
P06344 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.22□□□□□ -0.13
P06344 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.22□□□□□ -0.13
P06344 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.22□□□□□ -0.13
P06344 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
P06344 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms