Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.41□□□□□ -0.26
CfdP03953 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CfdP03953 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.41□□□□□ -0.26
CfdP03953 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.41□□□□□ -0.26
CfdP03953 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CfdP03953 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.41□□□□□ -0.26
CfdP03953 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CfdP03953 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.41□□□□□ -0.26
CfdP03953 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.4□□□□□ -0.26
CfdP03953 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CfdP03953 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CfdP03953 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CfdP03953 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.4□□□□□ -0.26
CfdP03953 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CfdP03953 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CfdP03953 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.4□□□□□ -0.26
CfdP03953 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.4□□□□□ -0.26
CfdP03953 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Gm18666-201ENSMUST00000190039 958 ntBASIC13.4□□□□□ -0.26
CfdP03953 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.4□□□□□ -0.26
CfdP03953 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CfdP03953 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CfdP03953 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CfdP03953 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CfdP03953 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
CfdP03953 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CfdP03953 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.39□□□□□ -0.27
CfdP03953 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CfdP03953 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CfdP03953 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.39□□□□□ -0.27
CfdP03953 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CfdP03953 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Gm7791-201ENSMUST00000219066 539 ntBASIC13.39□□□□□ -0.27
CfdP03953 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CfdP03953 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CfdP03953 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.39□□□□□ -0.27
CfdP03953 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CfdP03953 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CfdP03953 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CfdP03953 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CfdP03953 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.38□□□□□ -0.27
CfdP03953 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CfdP03953 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.38□□□□□ -0.27
CfdP03953 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CfdP03953 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.38□□□□□ -0.27
CfdP03953 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CfdP03953 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CfdP03953 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.38□□□□□ -0.27
CfdP03953 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms