Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H3f3cP02301 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
H3f3cP02301 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Gm27742-201ENSMUST00000184667 60 ntBASIC13.76□□□□□ -0.21
H3f3cP02301 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.75□□□□□ -0.21
H3f3cP02301 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
H3f3cP02301 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H3f3cP02301 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H3f3cP02301 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
H3f3cP02301 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3f3cP02301 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H3f3cP02301 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
H3f3cP02301 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
H3f3cP02301 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H3f3cP02301 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.74□□□□□ -0.21
H3f3cP02301 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
H3f3cP02301 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H3f3cP02301 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H3f3cP02301 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3f3cP02301 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
H3f3cP02301 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
H3f3cP02301 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.73□□□□□ -0.21
H3f3cP02301 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Gm7284-201ENSMUST00000131667 944 ntBASIC13.73□□□□□ -0.21
H3f3cP02301 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.73□□□□□ -0.21
H3f3cP02301 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.73□□□□□ -0.21
H3f3cP02301 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
H3f3cP02301 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3f3cP02301 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms