Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Vti1aO89116 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vti1aO89116 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vti1aO89116 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.24■□□□□ 0.35
Vti1aO89116 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vti1aO89116 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vti1aO89116 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Gm1401-201ENSMUST00000122048 772 ntBASIC17.23■□□□□ 0.35
Vti1aO89116 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Vti1aO89116 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.23■□□□□ 0.35
Vti1aO89116 Gm10060-201ENSMUST00000212002 111 ntBASIC17.23■□□□□ 0.35
Vti1aO89116 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.23■□□□□ 0.35
Vti1aO89116 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.23■□□□□ 0.35
Vti1aO89116 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vti1aO89116 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vti1aO89116 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Vti1aO89116 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vti1aO89116 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Vti1aO89116 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vti1aO89116 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.22■□□□□ 0.35
Vti1aO89116 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.22■□□□□ 0.35
Vti1aO89116 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vti1aO89116 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.22■□□□□ 0.35
Vti1aO89116 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.22■□□□□ 0.35
Vti1aO89116 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vti1aO89116 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vti1aO89116 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vti1aO89116 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.22■□□□□ 0.35
Vti1aO89116 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vti1aO89116 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vti1aO89116 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vti1aO89116 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Vti1aO89116 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.21■□□□□ 0.35
Vti1aO89116 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.21■□□□□ 0.35
Vti1aO89116 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.21■□□□□ 0.35
Vti1aO89116 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.21■□□□□ 0.35
Vti1aO89116 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vti1aO89116 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Vti1aO89116 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vti1aO89116 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Vti1aO89116 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vti1aO89116 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vti1aO89116 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vti1aO89116 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vti1aO89116 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vti1aO89116 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms