Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cops4O88544 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops4O88544 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cops4O88544 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Gm38027-201ENSMUST00000192315 235 ntBASIC14.81□□□□□ -0.04
Cops4O88544 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.81□□□□□ -0.04
Cops4O88544 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.81□□□□□ -0.04
Cops4O88544 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cops4O88544 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cops4O88544 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.81□□□□□ -0.04
Cops4O88544 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops4O88544 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cops4O88544 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.8□□□□□ -0.04
Cops4O88544 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Gm7638-201ENSMUST00000121348 967 ntBASIC14.8□□□□□ -0.04
Cops4O88544 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cops4O88544 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops4O88544 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.8□□□□□ -0.04
Cops4O88544 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cops4O88544 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.8□□□□□ -0.04
Cops4O88544 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cops4O88544 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Cops4O88544 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cops4O88544 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.79□□□□□ -0.04
Cops4O88544 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.79□□□□□ -0.04
Cops4O88544 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cops4O88544 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.79□□□□□ -0.04
Cops4O88544 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.79□□□□□ -0.04
Cops4O88544 Timm23-208ENSMUST00000226683 750 ntBASIC14.79□□□□□ -0.04
Cops4O88544 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cops4O88544 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops4O88544 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cops4O88544 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops4O88544 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cops4O88544 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops4O88544 Gm18958-201ENSMUST00000174258 762 ntBASIC14.78□□□□□ -0.04
Cops4O88544 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops4O88544 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms