Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Gm45167-201ENSMUST00000208007 322 ntBASIC15.18■□□□□ 0.02
Tgfbr3O88393 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.18■□□□□ 0.02
Tgfbr3O88393 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.17■□□□□ 0.02
Tgfbr3O88393 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tgfbr3O88393 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.16■□□□□ 0.02
Tgfbr3O88393 Gm37153-201ENSMUST00000193637 231 ntBASIC15.16■□□□□ 0.02
Tgfbr3O88393 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.16■□□□□ 0.02
Tgfbr3O88393 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr3O88393 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms