Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ubr1O70481 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Mir6956-201ENSMUST00000183598 62 ntBASIC20.61■□□□□ 0.89
Ubr1O70481 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr1O70481 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ubr1O70481 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ubr1O70481 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.61■□□□□ 0.89
Ubr1O70481 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ubr1O70481 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.6■□□□□ 0.89
Ubr1O70481 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.6■□□□□ 0.89
Ubr1O70481 Gm17271-201ENSMUST00000165535 355 ntBASIC20.6■□□□□ 0.89
Ubr1O70481 Mir6990-201ENSMUST00000183724 91 ntBASIC20.6■□□□□ 0.89
Ubr1O70481 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.6■□□□□ 0.89
Ubr1O70481 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.6■□□□□ 0.89
Ubr1O70481 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr1O70481 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.59■□□□□ 0.89
Ubr1O70481 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.59■□□□□ 0.89
Ubr1O70481 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.59■□□□□ 0.89
Ubr1O70481 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ubr1O70481 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Gm8318-201ENSMUST00000182954 872 ntBASIC20.59■□□□□ 0.89
Ubr1O70481 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.59■□□□□ 0.89
Ubr1O70481 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.59■□□□□ 0.89
Ubr1O70481 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr1O70481 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.58■□□□□ 0.89
Ubr1O70481 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr1O70481 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr1O70481 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.58■□□□□ 0.89
Ubr1O70481 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr1O70481 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.58■□□□□ 0.89
Ubr1O70481 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.58■□□□□ 0.89
Ubr1O70481 Gm20553-201ENSMUST00000204205 844 ntBASIC20.58■□□□□ 0.89
Ubr1O70481 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC20.58■□□□□ 0.89
Ubr1O70481 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr1O70481 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr1O70481 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ubr1O70481 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr1O70481 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Ubr1O70481 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ubr1O70481 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ubr1O70481 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr1O70481 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.57■□□□□ 0.88
Ubr1O70481 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Ubr1O70481 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ubr1O70481 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.56■□□□□ 0.88
Ubr1O70481 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.56■□□□□ 0.88
Ubr1O70481 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.56■□□□□ 0.88
Ubr1O70481 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ubr1O70481 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr1O70481 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms