Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim1O70400 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim1O70400 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.78■□□□□ 0.12
Pdlim1O70400 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Pdlim1O70400 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Gm6257-201ENSMUST00000163864 910 ntBASIC15.78■□□□□ 0.12
Pdlim1O70400 Gm25745-201ENSMUST00000174945 133 ntBASIC15.78■□□□□ 0.12
Pdlim1O70400 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.78■□□□□ 0.12
Pdlim1O70400 Gm27867-201ENSMUST00000184778 125 ntBASIC15.78■□□□□ 0.12
Pdlim1O70400 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.78■□□□□ 0.12
Pdlim1O70400 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.78■□□□□ 0.12
Pdlim1O70400 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Pdlim1O70400 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim1O70400 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pdlim1O70400 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pdlim1O70400 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Pdlim1O70400 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pdlim1O70400 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pdlim1O70400 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.77■□□□□ 0.12
Pdlim1O70400 Gm12644-201ENSMUST00000119935 606 ntBASIC15.77■□□□□ 0.12
Pdlim1O70400 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.77■□□□□ 0.12
Pdlim1O70400 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Pdlim1O70400 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim1O70400 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim1O70400 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim1O70400 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim1O70400 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim1O70400 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim1O70400 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim1O70400 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Pdlim1O70400 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim1O70400 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.76■□□□□ 0.11
Pdlim1O70400 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pdlim1O70400 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms