Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.18■□□□□ 0.02
Rdh5O55240 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Rdh5O55240 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Rdh5O55240 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Rdh5O55240 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.18■□□□□ 0.02
Rdh5O55240 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Gm45328-201ENSMUST00000210942 917 ntBASIC15.18■□□□□ 0.02
Rdh5O55240 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.18■□□□□ 0.02
Rdh5O55240 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.18■□□□□ 0.02
Rdh5O55240 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.18■□□□□ 0.02
Rdh5O55240 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rdh5O55240 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.18■□□□□ 0.02
Rdh5O55240 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh5O55240 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rdh5O55240 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rdh5O55240 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.17■□□□□ 0.02
Rdh5O55240 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Rdh5O55240 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Rdh5O55240 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rdh5O55240 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.17■□□□□ 0.02
Rdh5O55240 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Rdh5O55240 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh5O55240 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rdh5O55240 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.16■□□□□ 0.02
Rdh5O55240 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Dancr-204ENSMUST00000132389 2347 ntBASIC15.16■□□□□ 0.02
Rdh5O55240 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh5O55240 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rdh5O55240 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rdh5O55240 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.15■□□□□ 0.02
Rdh5O55240 Gm27741-201ENSMUST00000185060 237 ntBASIC15.15■□□□□ 0.02
Rdh5O55240 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.15■□□□□ 0.02
Rdh5O55240 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rdh5O55240 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Rdh5O55240 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Rdh5O55240 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh5O55240 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms