Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.62■□□□□ 0.41
Prom1O54990 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.61■□□□□ 0.41
Prom1O54990 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.61■□□□□ 0.41
Prom1O54990 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.61■□□□□ 0.41
Prom1O54990 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.61■□□□□ 0.41
Prom1O54990 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.61■□□□□ 0.41
Prom1O54990 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.61■□□□□ 0.41
Prom1O54990 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.61■□□□□ 0.41
Prom1O54990 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.61■□□□□ 0.41
Prom1O54990 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prom1O54990 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prom1O54990 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Prom1O54990 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.6■□□□□ 0.41
Prom1O54990 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.6■□□□□ 0.41
Prom1O54990 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.6■□□□□ 0.41
Prom1O54990 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.6■□□□□ 0.41
Prom1O54990 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.6■□□□□ 0.41
Prom1O54990 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.6■□□□□ 0.41
Prom1O54990 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prom1O54990 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prom1O54990 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.59■□□□□ 0.41
Prom1O54990 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Gm11764-201ENSMUST00000120221 623 ntBASIC17.59■□□□□ 0.41
Prom1O54990 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prom1O54990 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prom1O54990 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prom1O54990 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prom1O54990 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Prom1O54990 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prom1O54990 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prom1O54990 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.58■□□□□ 0.41
Prom1O54990 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prom1O54990 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prom1O54990 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prom1O54990 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prom1O54990 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prom1O54990 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Prom1O54990 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prom1O54990 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.57■□□□□ 0.4
Prom1O54990 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prom1O54990 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.57■□□□□ 0.4
Prom1O54990 Gm13597-201ENSMUST00000121239 375 ntBASIC17.57■□□□□ 0.4
Prom1O54990 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prom1O54990 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Prom1O54990 Gm37153-201ENSMUST00000193637 231 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms