Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Per2O54943 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Per2O54943 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Per2O54943 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.71■□□□□ 0.27
Per2O54943 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.71■□□□□ 0.27
Per2O54943 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.71■□□□□ 0.27
Per2O54943 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.71■□□□□ 0.27
Per2O54943 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.71■□□□□ 0.27
Per2O54943 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Per2O54943 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Per2O54943 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Per2O54943 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.7■□□□□ 0.26
Per2O54943 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.7■□□□□ 0.26
Per2O54943 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.7■□□□□ 0.26
Per2O54943 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.7■□□□□ 0.26
Per2O54943 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Gm25016-201ENSMUST00000158399 131 ntBASIC16.7■□□□□ 0.26
Per2O54943 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Per2O54943 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.7■□□□□ 0.26
Per2O54943 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Per2O54943 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Per2O54943 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.7■□□□□ 0.26
Per2O54943 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Per2O54943 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.69■□□□□ 0.26
Per2O54943 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Per2O54943 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Per2O54943 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Per2O54943 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Per2O54943 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Per2O54943 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Gm11950-201ENSMUST00000121615 838 ntBASIC16.68■□□□□ 0.26
Per2O54943 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.68■□□□□ 0.26
Per2O54943 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.68■□□□□ 0.26
Per2O54943 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.68■□□□□ 0.26
Per2O54943 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Per2O54943 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Per2O54943 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.68■□□□□ 0.26
Per2O54943 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms