Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.59■□□□□ 0.25
Cldn5O54942 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn5O54942 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn5O54942 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cldn5O54942 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldn5O54942 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn5O54942 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cldn5O54942 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn5O54942 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn5O54942 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.58■□□□□ 0.25
Cldn5O54942 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn5O54942 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn5O54942 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn5O54942 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Cldn5O54942 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.58■□□□□ 0.24
Cldn5O54942 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.58■□□□□ 0.24
Cldn5O54942 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Gm18195-201ENSMUST00000207604 706 ntBASIC16.58■□□□□ 0.24
Cldn5O54942 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.58■□□□□ 0.24
Cldn5O54942 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cldn5O54942 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn5O54942 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cldn5O54942 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cldn5O54942 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cldn5O54942 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.57■□□□□ 0.24
Cldn5O54942 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cldn5O54942 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm11780-201ENSMUST00000136880 516 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cldn5O54942 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm8825-201ENSMUST00000182565 998 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm4518-201ENSMUST00000182638 718 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.57■□□□□ 0.24
Cldn5O54942 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.57■□□□□ 0.24
Cldn5O54942 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Cldn5O54942 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn5O54942 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.56■□□□□ 0.24
Cldn5O54942 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Cldn5O54942 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cldn5O54942 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.56■□□□□ 0.24
Cldn5O54942 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.56■□□□□ 0.24
Cldn5O54942 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Gm25990-201ENSMUST00000102440 86 ntBASIC16.56■□□□□ 0.24
Cldn5O54942 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Mir5131-201ENSMUST00000175426 93 ntBASIC16.56■□□□□ 0.24
Cldn5O54942 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Gm10060-201ENSMUST00000212002 111 ntBASIC16.56■□□□□ 0.24
Cldn5O54942 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn5O54942 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cldn5O54942 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.55■□□□□ 0.24
Cldn5O54942 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms