Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smarce1O54941 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarce1O54941 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.05■□□□□ 0.64
Smarce1O54941 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Smarce1O54941 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smarce1O54941 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.05■□□□□ 0.64
Smarce1O54941 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.05■□□□□ 0.64
Smarce1O54941 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.05■□□□□ 0.64
Smarce1O54941 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Smarce1O54941 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smarce1O54941 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarce1O54941 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Smarce1O54941 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.04■□□□□ 0.64
Smarce1O54941 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.04■□□□□ 0.64
Smarce1O54941 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.04■□□□□ 0.64
Smarce1O54941 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.04■□□□□ 0.64
Smarce1O54941 Gm18959-201ENSMUST00000208954 655 ntBASIC19.04■□□□□ 0.64
Smarce1O54941 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Smarce1O54941 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarce1O54941 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smarce1O54941 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Smarce1O54941 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarce1O54941 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.03■□□□□ 0.64
Smarce1O54941 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarce1O54941 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smarce1O54941 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smarce1O54941 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smarce1O54941 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarce1O54941 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Smarce1O54941 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smarce1O54941 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.02■□□□□ 0.64
Smarce1O54941 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Smarce1O54941 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Gm27389-201ENSMUST00000183622 195 ntBASIC19.02■□□□□ 0.64
Smarce1O54941 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.02■□□□□ 0.64
Smarce1O54941 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smarce1O54941 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarce1O54941 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smarce1O54941 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarce1O54941 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarce1O54941 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarce1O54941 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Smarce1O54941 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms