Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.2■□□□□ 0.18
ChkaO54804 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.2■□□□□ 0.18
ChkaO54804 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Gm18032-201ENSMUST00000222541 538 ntBASIC16.2■□□□□ 0.18
ChkaO54804 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.2■□□□□ 0.18
ChkaO54804 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ChkaO54804 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.2■□□□□ 0.18
ChkaO54804 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
ChkaO54804 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
ChkaO54804 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ChkaO54804 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ChkaO54804 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Gm11355-201ENSMUST00000121120 306 ntBASIC16.19■□□□□ 0.18
ChkaO54804 Gm18101-201ENSMUST00000215769 548 ntBASIC16.19■□□□□ 0.18
ChkaO54804 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.19■□□□□ 0.18
ChkaO54804 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.19■□□□□ 0.18
ChkaO54804 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ChkaO54804 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ChkaO54804 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.18■□□□□ 0.18
ChkaO54804 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ChkaO54804 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ChkaO54804 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.18■□□□□ 0.18
ChkaO54804 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.18■□□□□ 0.18
ChkaO54804 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.18■□□□□ 0.18
ChkaO54804 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ChkaO54804 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.18■□□□□ 0.18
ChkaO54804 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.18■□□□□ 0.18
ChkaO54804 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ChkaO54804 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
ChkaO54804 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
ChkaO54804 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ChkaO54804 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ChkaO54804 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ChkaO54804 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.17■□□□□ 0.18
ChkaO54804 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.17■□□□□ 0.18
ChkaO54804 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ChkaO54804 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ChkaO54804 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms