Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Alx4O35137 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.3□□□□□ -0.12
Alx4O35137 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx4O35137 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.29□□□□□ -0.12
Alx4O35137 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Alx4O35137 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Alx4O35137 Gm13168-201ENSMUST00000121771 632 ntBASIC14.29□□□□□ -0.12
Alx4O35137 Gm16061-201ENSMUST00000122167 857 ntBASIC14.29□□□□□ -0.12
Alx4O35137 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Alx4O35137 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Alx4O35137 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.29□□□□□ -0.12
Alx4O35137 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Alx4O35137 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Alx4O35137 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Alx4O35137 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Alx4O35137 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Alx4O35137 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Alx4O35137 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.28□□□□□ -0.12
Alx4O35137 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.28□□□□□ -0.12
Alx4O35137 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.28□□□□□ -0.12
Alx4O35137 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.28□□□□□ -0.12
Alx4O35137 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Alx4O35137 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Alx4O35137 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Alx4O35137 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx4O35137 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx4O35137 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx4O35137 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Alx4O35137 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Alx4O35137 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Alx4O35137 Gm10653-202ENSMUST00000139570 835 ntBASIC14.27□□□□□ -0.13
Alx4O35137 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.27□□□□□ -0.13
Alx4O35137 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Mir5122-201ENSMUST00000175004 89 ntBASIC14.27□□□□□ -0.13
Alx4O35137 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.27□□□□□ -0.13
Alx4O35137 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Alx4O35137 Gm2274-201ENSMUST00000184539 609 ntBASIC14.27□□□□□ -0.13
Alx4O35137 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Alx4O35137 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Alx4O35137 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Alx4O35137 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Alx4O35137 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Alx4O35137 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms