Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.05□□□□□ -0.8
Pkd1O08852 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.05□□□□□ -0.8
Pkd1O08852 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.05□□□□□ -0.8
Pkd1O08852 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC10.05□□□□□ -0.8
Pkd1O08852 Gm15487-201ENSMUST00000122373 465 ntBASIC10.05□□□□□ -0.8
Pkd1O08852 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Pkd1O08852 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.05□□□□□ -0.8
Pkd1O08852 Gm44855-201ENSMUST00000205725 362 ntBASIC10.05□□□□□ -0.8
Pkd1O08852 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.05□□□□□ -0.8
Pkd1O08852 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.05□□□□□ -0.8
Pkd1O08852 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Pkd1O08852 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC10.05□□□□□ -0.8
Pkd1O08852 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.05□□□□□ -0.8
Pkd1O08852 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Gm43294-201ENSMUST00000202850 2490 ntBASIC10.05□□□□□ -0.8
Pkd1O08852 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pkd1O08852 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Pkd1O08852 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pkd1O08852 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Pkd1O08852 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.04□□□□□ -0.8
Pkd1O08852 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.04□□□□□ -0.8
Pkd1O08852 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pkd1O08852 Gm15653-201ENSMUST00000119247 907 ntBASIC10.04□□□□□ -0.8
Pkd1O08852 Gm15321-201ENSMUST00000121290 288 ntBASIC10.04□□□□□ -0.8
Pkd1O08852 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.04□□□□□ -0.8
Pkd1O08852 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pkd1O08852 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Pkd1O08852 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.04□□□□□ -0.8
Pkd1O08852 Gm27430-201ENSMUST00000184585 107 ntBASIC10.04□□□□□ -0.8
Pkd1O08852 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Gm44333-201ENSMUST00000197168 107 ntBASIC10.04□□□□□ -0.8
Pkd1O08852 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.04□□□□□ -0.8
Pkd1O08852 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pkd1O08852 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pkd1O08852 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pkd1O08852 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pkd1O08852 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC10.03□□□□□ -0.8
Pkd1O08852 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Gm13453-201ENSMUST00000118708 357 ntBASIC10.03□□□□□ -0.8
Pkd1O08852 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.03□□□□□ -0.8
Pkd1O08852 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.03□□□□□ -0.8
Pkd1O08852 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.03□□□□□ -0.8
Pkd1O08852 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pkd1O08852 Gm6007-201ENSMUST00000208170 823 ntBASIC10.03□□□□□ -0.8
Pkd1O08852 Gm9063-201ENSMUST00000223299 582 ntBASIC10.03□□□□□ -0.8
Pkd1O08852 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.03□□□□□ -0.8
Pkd1O08852 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Gm2810-201ENSMUST00000118681 990 ntBASIC10.03□□□□□ -0.8
Pkd1O08852 Gm28630-201ENSMUST00000187806 498 ntBASIC10.03□□□□□ -0.8
Pkd1O08852 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pkd1O08852 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Pkd1O08852 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms