Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trove2O08848 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trove2O08848 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trove2O08848 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Asic1-205ENSMUST00000228185 1818 ntBASIC16.47■□□□□ 0.23
Trove2O08848 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.47■□□□□ 0.23
Trove2O08848 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.47■□□□□ 0.23
Trove2O08848 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Gm21814-202ENSMUST00000203277 873 ntBASIC16.47■□□□□ 0.23
Trove2O08848 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.47■□□□□ 0.23
Trove2O08848 Il3ra-202ENSMUST00000223589 738 ntBASIC16.47■□□□□ 0.23
Trove2O08848 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.47■□□□□ 0.23
Trove2O08848 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trove2O08848 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trove2O08848 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.46■□□□□ 0.23
Trove2O08848 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.46■□□□□ 0.23
Trove2O08848 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trove2O08848 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trove2O08848 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Trove2O08848 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.46■□□□□ 0.23
Trove2O08848 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trove2O08848 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trove2O08848 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.45■□□□□ 0.22
Trove2O08848 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trove2O08848 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.45■□□□□ 0.22
Trove2O08848 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trove2O08848 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.45■□□□□ 0.22
Trove2O08848 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trove2O08848 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trove2O08848 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trove2O08848 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Gm18958-201ENSMUST00000174258 762 ntBASIC16.44■□□□□ 0.22
Trove2O08848 Gm27463-201ENSMUST00000183569 57 ntBASIC16.44■□□□□ 0.22
Trove2O08848 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trove2O08848 Gm7791-201ENSMUST00000219066 539 ntBASIC16.44■□□□□ 0.22
Trove2O08848 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trove2O08848 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trove2O08848 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.43■□□□□ 0.22
Trove2O08848 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trove2O08848 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms