Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Rprl3-201ENSMUST00000157400 290 ntBASIC16.39■□□□□ 0.21
Ercc2O08811 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ercc2O08811 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.39■□□□□ 0.21
Ercc2O08811 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.39■□□□□ 0.21
Ercc2O08811 Gm21362-201ENSMUST00000194272 928 ntBASIC16.39■□□□□ 0.21
Ercc2O08811 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ercc2O08811 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ercc2O08811 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ercc2O08811 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ercc2O08811 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.38■□□□□ 0.21
Ercc2O08811 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.38■□□□□ 0.21
Ercc2O08811 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.38■□□□□ 0.21
Ercc2O08811 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.38■□□□□ 0.21
Ercc2O08811 Gm17807-201ENSMUST00000186869 298 ntBASIC16.38■□□□□ 0.21
Ercc2O08811 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.38■□□□□ 0.21
Ercc2O08811 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.38■□□□□ 0.21
Ercc2O08811 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ercc2O08811 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ercc2O08811 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.37■□□□□ 0.21
Ercc2O08811 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ercc2O08811 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Ank2-226ENSMUST00000189368 339 ntBASIC16.37■□□□□ 0.21
Ercc2O08811 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ercc2O08811 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ercc2O08811 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.37■□□□□ 0.21
Ercc2O08811 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ercc2O08811 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.36■□□□□ 0.21
Ercc2O08811 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Ercc2O08811 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Ercc2O08811 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Ercc2O08811 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Ercc2O08811 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.36■□□□□ 0.21
Ercc2O08811 Gm44454-201ENSMUST00000198541 138 ntBASIC16.36■□□□□ 0.21
Ercc2O08811 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.36■□□□□ 0.21
Ercc2O08811 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.36■□□□□ 0.21
Ercc2O08811 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ercc2O08811 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.36■□□□□ 0.21
Ercc2O08811 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ercc2O08811 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ercc2O08811 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms