Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
ClockO08785 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ClockO08785 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.25■□□□□ 0.03
ClockO08785 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.25■□□□□ 0.03
ClockO08785 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.25■□□□□ 0.03
ClockO08785 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ClockO08785 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ClockO08785 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.25■□□□□ 0.03
ClockO08785 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ClockO08785 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ClockO08785 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClockO08785 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.24■□□□□ 0.03
ClockO08785 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.24■□□□□ 0.03
ClockO08785 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ClockO08785 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.24■□□□□ 0.03
ClockO08785 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.24■□□□□ 0.03
ClockO08785 Il3ra-202ENSMUST00000223589 738 ntBASIC15.24■□□□□ 0.03
ClockO08785 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ClockO08785 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.24■□□□□ 0.03
ClockO08785 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
ClockO08785 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClockO08785 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ClockO08785 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.23■□□□□ 0.03
ClockO08785 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.23■□□□□ 0.03
ClockO08785 Gm37856-201ENSMUST00000191634 999 ntBASIC15.23■□□□□ 0.03
ClockO08785 Trmt13-210ENSMUST00000198454 880 ntBASIC15.23■□□□□ 0.03
ClockO08785 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.23■□□□□ 0.03
ClockO08785 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.23■□□□□ 0.03
ClockO08785 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ClockO08785 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ClockO08785 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ClockO08785 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClockO08785 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.23■□□□□ 0.03
ClockO08785 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.22■□□□□ 0.03
ClockO08785 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.22■□□□□ 0.03
ClockO08785 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ClockO08785 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Gm12527-201ENSMUST00000117967 564 ntBASIC15.22■□□□□ 0.03
ClockO08785 Gm7638-201ENSMUST00000121348 967 ntBASIC15.22■□□□□ 0.03
ClockO08785 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.22■□□□□ 0.03
ClockO08785 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.22■□□□□ 0.03
ClockO08785 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.22■□□□□ 0.03
ClockO08785 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ClockO08785 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClockO08785 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms