Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc1G3X9F6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh3tc1G3X9F6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc1G3X9F6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc1G3X9F6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Gm18489-201ENSMUST00000172565 551 ntBASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Auts2-212ENSMUST00000178555 309 ntBASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc1G3X9F6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Gm19164-201ENSMUST00000210667 640 ntBASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc1G3X9F6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Gm7063-201ENSMUST00000186840 981 ntBASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc1G3X9F6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Rarb-207ENSMUST00000225921 2756 ntBASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc1G3X9F6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Gm11025-201ENSMUST00000140773 466 ntBASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc1G3X9F6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms