Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Gm8000-201ENSMUST00000188378 592 ntBASIC16.22■□□□□ 0.19
Ccdc149F6V035 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Gm18622-201ENSMUST00000219361 595 ntBASIC16.22■□□□□ 0.19
Ccdc149F6V035 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc149F6V035 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.21■□□□□ 0.19
Ccdc149F6V035 Psmb5-202ENSMUST00000227257 622 ntBASIC16.21■□□□□ 0.19
Ccdc149F6V035 Gm5867-201ENSMUST00000063197 592 ntBASIC16.21■□□□□ 0.19
Ccdc149F6V035 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc149F6V035 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc149F6V035 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc149F6V035 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
Ccdc149F6V035 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc149F6V035 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc149F6V035 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc149F6V035 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.2■□□□□ 0.18
Ccdc149F6V035 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.2■□□□□ 0.18
Ccdc149F6V035 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc149F6V035 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.19■□□□□ 0.18
Ccdc149F6V035 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Gm37935-201ENSMUST00000192012 982 ntBASIC16.19■□□□□ 0.18
Ccdc149F6V035 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc149F6V035 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc149F6V035 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms