Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.19■□□□□ 0.66
Ube4aE9Q735 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Mir3113-201ENSMUST00000175478 76 ntBASIC19.18■□□□□ 0.66
Ube4aE9Q735 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.18■□□□□ 0.66
Ube4aE9Q735 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4aE9Q735 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.17■□□□□ 0.66
Ube4aE9Q735 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.17■□□□□ 0.66
Ube4aE9Q735 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Gm25911-201ENSMUST00000157621 56 ntBASIC19.17■□□□□ 0.66
Ube4aE9Q735 Gm27300-201ENSMUST00000184085 97 ntBASIC19.17■□□□□ 0.66
Ube4aE9Q735 Gm27335-201ENSMUST00000184758 97 ntBASIC19.17■□□□□ 0.66
Ube4aE9Q735 Gm27397-201ENSMUST00000184997 107 ntBASIC19.17■□□□□ 0.66
Ube4aE9Q735 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4aE9Q735 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.16■□□□□ 0.66
Ube4aE9Q735 Gm23935-201ENSMUST00000102303 57 ntBASIC19.16■□□□□ 0.66
Ube4aE9Q735 Gm24270-201ENSMUST00000102326 57 ntBASIC19.16■□□□□ 0.66
Ube4aE9Q735 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Gm24245-201ENSMUST00000157318 57 ntBASIC19.16■□□□□ 0.66
Ube4aE9Q735 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4aE9Q735 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Gm18489-201ENSMUST00000172565 551 ntBASIC19.15■□□□□ 0.66
Ube4aE9Q735 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.15■□□□□ 0.66
Ube4aE9Q735 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.15■□□□□ 0.66
Ube4aE9Q735 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.15■□□□□ 0.66
Ube4aE9Q735 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.15■□□□□ 0.66
Ube4aE9Q735 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.15■□□□□ 0.66
Ube4aE9Q735 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ube4aE9Q735 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms