Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Gm4535-201ENSMUST00000182274 558 ntBASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Gm18622-201ENSMUST00000219361 595 ntBASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Gm10355-201ENSMUST00000097146 517 ntBASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Gm13418-201ENSMUST00000119097 944 ntBASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Gm11780-201ENSMUST00000136880 516 ntBASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Gm6257-201ENSMUST00000163864 910 ntBASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb9E9Q5G2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb9E9Q5G2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Mzt1-203ENSMUST00000227948 952 ntBASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb9E9Q5G2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms