Protein–RNA interactions for Protein: E9Q1W3

Neb, Nebulin, mousemouse

Predictions only

Length 7,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NebE9Q1W3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
NebE9Q1W3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm22189-201ENSMUST00000103822 86 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12616-201ENSMUST00000118594 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12384-201ENSMUST00000119228 919 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12624-201ENSMUST00000177615 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12621-201ENSMUST00000177760 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12615-201ENSMUST00000177970 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12622-201ENSMUST00000177975 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12627-201ENSMUST00000178412 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12625-201ENSMUST00000179122 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12614-201ENSMUST00000179586 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm12613-201ENSMUST00000180323 382 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm45865-201ENSMUST00000211815 945 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm25880-201ENSMUST00000104331 132 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm42941-201ENSMUST00000200347 1321 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NebE9Q1W3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NebE9Q1W3 Dapk1-207ENSMUST00000226059 5009 ntBASIC4.31□□□□□ -1.72
NebE9Q1W3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm12390-201ENSMUST00000117897 397 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC4.3□□□□□ -1.72
NebE9Q1W3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm20445-201ENSMUST00000061905 565 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm9279-201ENSMUST00000223175 1606 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm5370-201ENSMUST00000187187 574 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 Mir433-201ENSMUST00000093564 124 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm5187-201ENSMUST00000117317 991 ntBASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NebE9Q1W3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC4.3□□□□□ -1.72
NebE9Q1W3 Gm3436-201ENSMUST00000179930 840 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms