Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm18624-201ENSMUST00000220966 658 ntBASIC8.91□□□□□ -0.98
Herc1E9PZP8 AC117588.1-201ENSMUST00000228510 999 ntBASIC8.91□□□□□ -0.98
Herc1E9PZP8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm20445-201ENSMUST00000061905 565 ntBASIC8.91□□□□□ -0.98
Herc1E9PZP8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm14723-201ENSMUST00000118686 215 ntBASIC8.91□□□□□ -0.98
Herc1E9PZP8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm23931-201ENSMUST00000103842 109 ntBASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm4984-201ENSMUST00000115987 360 ntBASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm6539-201ENSMUST00000119157 1064 ntBASIC8.91□□□□□ -0.98
Herc1E9PZP8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC8.91□□□□□ -0.98
Herc1E9PZP8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 Gm8835-201ENSMUST00000173096 1169 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 Gm9002-201ENSMUST00000178437 499 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Gm10327-201ENSMUST00000105222 1002 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 Gm4875-201ENSMUST00000118257 786 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 Gm29199-201ENSMUST00000187766 775 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC8.9□□□□□ -0.98
Herc1E9PZP8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc1E9PZP8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC8.9□□□□□ -0.99
Herc1E9PZP8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC8.9□□□□□ -0.99
Herc1E9PZP8 AC140451.2-201ENSMUST00000228030 664 ntBASIC8.9□□□□□ -0.99
Herc1E9PZP8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
Herc1E9PZP8 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm13410-201ENSMUST00000117058 1415 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm37259-201ENSMUST00000193903 849 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm45906-201ENSMUST00000208911 1430 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Shd-206ENSMUST00000225145 998 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm44799-201ENSMUST00000207639 1202 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm7067-201ENSMUST00000207698 1249 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm5184-201ENSMUST00000220417 1702 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms