Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Gm29667-201ENSMUST00000190817 490 ntBASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Gm10478-201ENSMUST00000084451 396 ntBASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm8062-201ENSMUST00000139696 444 ntBASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm13226-201ENSMUST00000117838 404 ntBASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm16570-201ENSMUST00000161951 436 ntBASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Gm37466-201ENSMUST00000195692 652 ntBASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a3E9PWQ3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a3E9PWQ3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Gm8344-201ENSMUST00000119813 856 ntBASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Gm14767-201ENSMUST00000121559 586 ntBASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Mir1982-201ENSMUST00000157368 74 ntBASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a3E9PWQ3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Gm9385-201ENSMUST00000117563 472 ntBASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.87■□□□□ 0.13
Col6a3E9PWQ3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm42612-201ENSMUST00000197986 623 ntBASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm43170-201ENSMUST00000199827 612 ntBASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms