Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28043E0CXC2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28043E0CXC2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm28043E0CXC2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.08■□□□□ 0.17
Gm28043E0CXC2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm28043E0CXC2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm28043E0CXC2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Mir1668-201ENSMUST00000184114 107 ntBASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28043E0CXC2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Gm7213-201ENSMUST00000215977 950 ntBASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Gm9987-201ENSMUST00000069768 567 ntBASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28043E0CXC2 Sybu-209ENSMUST00000228639 4113 ntBASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms