Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccnb1ip1D3Z3K2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccnb1ip1D3Z3K2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm21956-201ENSMUST00000179946 522 ntBASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Mtag2-201ENSMUST00000058665 714 ntBASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccnb1ip1D3Z3K2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccnb1ip1D3Z3K2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm4974-201ENSMUST00000209974 875 ntBASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccnb1ip1D3Z3K2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms