Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Syce3B5KM66 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
Syce3B5KM66 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Syce3B5KM66 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Syce3B5KM66 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syce3B5KM66 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.38■□□□□ 0.53
Syce3B5KM66 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Syce3B5KM66 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Syce3B5KM66 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Gm13186-201ENSMUST00000118031 316 ntBASIC18.38■□□□□ 0.53
Syce3B5KM66 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.38■□□□□ 0.53
Syce3B5KM66 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Syce3B5KM66 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syce3B5KM66 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Syce3B5KM66 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Syce3B5KM66 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.37■□□□□ 0.53
Syce3B5KM66 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Syce3B5KM66 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
Syce3B5KM66 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syce3B5KM66 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.36■□□□□ 0.53
Syce3B5KM66 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Syce3B5KM66 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Syce3B5KM66 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Syce3B5KM66 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.36■□□□□ 0.53
Syce3B5KM66 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Syce3B5KM66 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.36■□□□□ 0.53
Syce3B5KM66 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syce3B5KM66 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.35■□□□□ 0.53
Syce3B5KM66 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.35■□□□□ 0.53
Syce3B5KM66 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.35■□□□□ 0.53
Syce3B5KM66 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.35■□□□□ 0.53
Syce3B5KM66 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Syce3B5KM66 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.35■□□□□ 0.53
Syce3B5KM66 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syce3B5KM66 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms