Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Dancr-204ENSMUST00000132389 2347 ntBASIC18.71■□□□□ 0.59
Usp42B2RQC2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.71■□□□□ 0.59
Usp42B2RQC2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Usp42B2RQC2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Usp42B2RQC2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Gm34391-201ENSMUST00000203706 907 ntBASIC18.7■□□□□ 0.58
Usp42B2RQC2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp42B2RQC2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Gm12644-201ENSMUST00000119935 606 ntBASIC18.69■□□□□ 0.58
Usp42B2RQC2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Gm7506-201ENSMUST00000207758 815 ntBASIC18.69■□□□□ 0.58
Usp42B2RQC2 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.69■□□□□ 0.58
Usp42B2RQC2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp42B2RQC2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.68■□□□□ 0.58
Usp42B2RQC2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp42B2RQC2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.67■□□□□ 0.58
Usp42B2RQC2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Gm17971-201ENSMUST00000190239 806 ntBASIC18.67■□□□□ 0.58
Usp42B2RQC2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms