Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gm12887B1AVM1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gm12887B1AVM1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm12887B1AVM1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm12887B1AVM1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Actl10-202ENSMUST00000226583 1501 ntBASIC13□□□□□ -0.33
Gm12887B1AVM1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Gm43183-201ENSMUST00000200632 547 ntBASIC13□□□□□ -0.33
Gm12887B1AVM1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm12887B1AVM1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13□□□□□ -0.33
Gm12887B1AVM1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm12887B1AVM1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms