Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a5A6H584 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm18489-201ENSMUST00000172565 551 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm4518-201ENSMUST00000182638 718 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm6745-201ENSMUST00000199216 526 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.02□□□□□ -0.49
Col6a5A6H584 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.02□□□□□ -0.49
Col6a5A6H584 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col6a5A6H584 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.02□□□□□ -0.49
Col6a5A6H584 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a5A6H584 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a5A6H584 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.01□□□□□ -0.49
Col6a5A6H584 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a5A6H584 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col6a5A6H584 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a5A6H584 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.01□□□□□ -0.49
Col6a5A6H584 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.01□□□□□ -0.49
Col6a5A6H584 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col6a5A6H584 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col6a5A6H584 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a5A6H584 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12□□□□□ -0.49
Col6a5A6H584 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12□□□□□ -0.49
Col6a5A6H584 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Gm18246-201ENSMUST00000221023 728 ntBASIC12□□□□□ -0.49
Col6a5A6H584 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a5A6H584 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col6a5A6H584 Gm7901-201ENSMUST00000120430 1597 ntBASIC12□□□□□ -0.49
Col6a5A6H584 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col6a5A6H584 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a5A6H584 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Gm24694-201ENSMUST00000180054 110 ntBASIC12□□□□□ -0.49
Col6a5A6H584 Gm27663-201ENSMUST00000184839 110 ntBASIC12□□□□□ -0.49
Col6a5A6H584 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12□□□□□ -0.49
Col6a5A6H584 Gm9908-201ENSMUST00000211534 448 ntBASIC12□□□□□ -0.49
Col6a5A6H584 Gm9257-201ENSMUST00000221254 232 ntBASIC12□□□□□ -0.49
Col6a5A6H584 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col6a5A6H584 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col6a5A6H584 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a5A6H584 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms