Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.95□□□□□ -0.34
Chd6A3KFM7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Gm43179-201ENSMUST00000198797 275 ntBASIC12.95□□□□□ -0.34
Chd6A3KFM7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.94□□□□□ -0.34
Chd6A3KFM7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.94□□□□□ -0.34
Chd6A3KFM7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.94□□□□□ -0.34
Chd6A3KFM7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.94□□□□□ -0.34
Chd6A3KFM7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Rpph1-201ENSMUST00000175096 319 ntBASIC12.94□□□□□ -0.34
Chd6A3KFM7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.94□□□□□ -0.34
Chd6A3KFM7 Gm6218-201ENSMUST00000219812 628 ntBASIC12.94□□□□□ -0.34
Chd6A3KFM7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chd6A3KFM7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Gm25144-201ENSMUST00000179561 110 ntBASIC12.93□□□□□ -0.34
Chd6A3KFM7 Gm25352-201ENSMUST00000179815 110 ntBASIC12.93□□□□□ -0.34
Chd6A3KFM7 Gm8515-201ENSMUST00000194852 576 ntBASIC12.93□□□□□ -0.34
Chd6A3KFM7 Gm18057-201ENSMUST00000208220 503 ntBASIC12.93□□□□□ -0.34
Chd6A3KFM7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.93□□□□□ -0.34
Chd6A3KFM7 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.93□□□□□ -0.34
Chd6A3KFM7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd6A3KFM7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.92□□□□□ -0.34
Chd6A3KFM7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Gm45668-201ENSMUST00000211271 493 ntBASIC12.92□□□□□ -0.34
Chd6A3KFM7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.92□□□□□ -0.34
Chd6A3KFM7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.92□□□□□ -0.34
Chd6A3KFM7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Gm10478-201ENSMUST00000084451 396 ntBASIC12.92□□□□□ -0.34
Chd6A3KFM7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd6A3KFM7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms