Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.73■□□□□ 0.27
Scn1aA2APX8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn1aA2APX8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn1aA2APX8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Gm27628-201ENSMUST00000184911 107 ntBASIC16.72■□□□□ 0.27
Scn1aA2APX8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.72■□□□□ 0.27
Scn1aA2APX8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Scn1aA2APX8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Scn1aA2APX8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn1aA2APX8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn1aA2APX8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn1aA2APX8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.7■□□□□ 0.26
Scn1aA2APX8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.7■□□□□ 0.26
Scn1aA2APX8 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.7■□□□□ 0.26
Scn1aA2APX8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.7■□□□□ 0.26
Scn1aA2APX8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Scn1aA2APX8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn1aA2APX8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.69■□□□□ 0.26
Scn1aA2APX8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Gm18622-201ENSMUST00000219361 595 ntBASIC16.69■□□□□ 0.26
Scn1aA2APX8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn1aA2APX8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms