Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-1A0N8R1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Gm13436-201ENSMUST00000120418 567 ntBASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-1A0N8R1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms