Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9-4A0A0B4J1K2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-4A0A0B4J1K2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Mir3081-201ENSMUST00000175305 84 ntBASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-4A0A0B4J1K2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms