Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv5A0A0B4J1G9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm42545-201ENSMUST00000202755 922 ntBASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv5A0A0B4J1G9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm18025-201ENSMUST00000221733 862 ntBASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv5A0A0B4J1G9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms