Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms