Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav6-5A0A075B6B5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-5A0A075B6B5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Gm36967-201ENSMUST00000193814 266 ntBASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms