Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.15□□□□□ -0.3
Trav18A0A075B656 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav18A0A075B656 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav18A0A075B656 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.14□□□□□ -0.31
Trav18A0A075B656 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav18A0A075B656 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav18A0A075B656 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.13□□□□□ -0.31
Trav18A0A075B656 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav18A0A075B656 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.12□□□□□ -0.31
Trav18A0A075B656 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms