Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.74□□□□□ -0.37
Trav17A0A075B655 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Gm12527-201ENSMUST00000117967 564 ntBASIC12.74□□□□□ -0.37
Trav17A0A075B655 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.74□□□□□ -0.37
Trav17A0A075B655 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.74□□□□□ -0.37
Trav17A0A075B655 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav17A0A075B655 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav17A0A075B655 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Mir1199-201ENSMUST00000117015 119 ntBASIC12.73□□□□□ -0.37
Trav17A0A075B655 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.73□□□□□ -0.37
Trav17A0A075B655 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav17A0A075B655 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.72□□□□□ -0.37
Trav17A0A075B655 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms