Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Gm26833-201ENSMUST00000180899 440 ntBASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Gm37820-201ENSMUST00000194021 2147 ntBASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-4A0A075B654 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Asic1-205ENSMUST00000228185 1818 ntBASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Gm10129-202ENSMUST00000193100 1316 ntBASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Trav3-4A0A075B654 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Gm40848-201ENSMUST00000221998 324 ntBASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms