Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.42□□□□□ -0.42
Trav16A0A075B653 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Gm8495-201ENSMUST00000188740 694 ntBASIC12.42□□□□□ -0.42
Trav16A0A075B653 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.41□□□□□ -0.42
Trav16A0A075B653 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.41□□□□□ -0.42
Trav16A0A075B653 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.41□□□□□ -0.42
Trav16A0A075B653 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.41□□□□□ -0.42
Trav16A0A075B653 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16A0A075B653 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.41□□□□□ -0.42
Trav16A0A075B653 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.4□□□□□ -0.42
Trav16A0A075B653 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav16A0A075B653 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.4□□□□□ -0.42
Trav16A0A075B653 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16A0A075B653 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trav16A0A075B653 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16A0A075B653 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.39□□□□□ -0.43
Trav16A0A075B653 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms