Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Zfp783-201ENSMUST00000095946 670 ntBASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav12-3A0A075B648 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12-3A0A075B648 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12-3A0A075B648 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12-3A0A075B648 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms