Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13-1A0A075B644 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Gm24589-201ENSMUST00000116692 94 ntBASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-1A0A075B644 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13-1A0A075B644 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13-1A0A075B644 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-1A0A075B644 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms