Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Gm18115-201ENSMUST00000221209 621 ntBASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Phf7-203ENSMUST00000226565 1971 ntBASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Gm38027-201ENSMUST00000192315 235 ntBASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-2A0A075B638 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav4-2A0A075B638 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-2A0A075B638 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms