Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-5A0A075B621 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav6n-5A0A075B621 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-5A0A075B621 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms