Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Gm18671-201ENSMUST00000214826 683 ntBASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Rab3c-203ENSMUST00000224180 967 ntBASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 BC037039-201ENSMUST00000192003 2205 ntBASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav7n-4A0A075B620 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Gm10517-202ENSMUST00000192970 758 ntBASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7n-4A0A075B620 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms