Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-1A0A075B5S6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-1A0A075B5S6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm1401-201ENSMUST00000122048 772 ntBASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Mir6404-201ENSMUST00000183699 94 ntBASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm27525-201ENSMUST00000184465 107 ntBASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-1A0A075B5S6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm37935-201ENSMUST00000192012 982 ntBASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv3-1A0A075B5S6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.66□□□□□ -0.38
Ighv3-1A0A075B5S6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms